Analysis of Chagas disease vectors occurrence data: the Argentinean triatomine species database
Autores/as: Soledad Ceccarelli, Agustín Balsalobre, Maria Eugenia Cano, Delmi Canale, Patricia Lobbia, Raúl Stariolo, Jorge Eduardo Rabinovich & Gerardo Anibal Marti
Detalles de la publicación:
Número de páginas: 6
Nombre del medio de comunicación: Ecological Informatics
Fecha de publicación: 2022
There are several identification tools that can assist researchers, technicians and the community in the recognition of Chagas vector insects (triatomines), from other insects with similar morphologies. They involve using dichotomous keys, field guides, expert knowledge or, in more recent approaches, through the classification by a neural network of high quality photographs taken in standardized conditions. The aim of this research was to develop a deep neural network to recognize triatomines (insects associated with vectorial transmission of Chagas disease) directly from photos taken with any commonly available mobile device, without any other specialized equipment. To overcome the shortcomings of taking images using specific instruments and a controlled environment an innovative machine-learning approach was used: Fastai with Pytorch, a combination of open-source software for deep learning. The Convolutional Neural Network (CNN) was trained with triatomine photos, reaching a correct identification in 94.3% of the cases. Results were validated using photos sent by citizen scientists from the GeoVin project, resulting in 91.4% of correct identification of triatomines. The CNN provides a lightweight, robust method that even works with blurred images, poor lighting and even with the presence of other subjects and objects in the same frame. Future steps include the inclusion of the CNN into the framework of the GeoVin science project, which will also allow to further train the network using the photos sent by the citizen scientists. This would allow the participation of the community in the identification and monitoring of the vector insects, particularly in regions where government-led monitoring programmes are not frequent due to their low accessibility and high costs.